PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01384.1.g00190.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 390aa    MW: 42165.6 Da    PI: 8.9933
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01384.1.g00190.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18169217153
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                                   ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Zpz_sc01384.1.g00190.1.am.mk 169 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 217
                                   59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.30E-32169228No hitNo description
Gene3DG3DSA:3.30.730.101.6E-32170227IPR001471AP2/ERF domain
PfamPF008471.8E-11170214IPR001471AP2/ERF domain
SMARTSM003809.7E-39170233IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-20170228IPR016177DNA-binding domain
PROSITE profilePS5103221.878170227IPR001471AP2/ERF domain
PRINTSPR003673.4E-10171182IPR001471AP2/ERF domain
PRINTSPR003673.4E-10193209IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MDLILGSLHG LTAQDSQPPP RPACTFHGRA ARAFTAKDPS EQLQQQKVPS AKNSLTHVSE  60
WSRALRSWFG SLRARLQPSS NIINEVAKGV GEGVYYQCPG SRGWLCHPLQ FTDSAADPTH  120
LLHFPSSCFP SPPHQDSSTV GPAFSVLPWR RICRPCPPAE QRISMVQSKK FRGVRQRHWG  180
SWVSEIRHPL LKRRVWLGTF ETAEEAARAY DEAAVLMSGR NAKTNFPVPR SATGELAPVP  240
AARDSRGGVG SSSAVGGSNT TNLSQILSAK LRKCCKTPSP SLTCLRLDPE KSHIGVWQKR  300
AGARADSSWV MTVELNKDAA AAATSSSEEP TLSYGAATTP TSTSTTTDSP PAMDDEERIA  360
LQMIEELLGR SGPVDHSHGM LLSGEGSLII
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-15167235270ATERF1
3gcc_A4e-15167235270ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965944.11e-112PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI333e-75WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLK3Y2H01e-112K3Y2H0_SETIT; Uncharacterized protein
STRINGSi008394m1e-111(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-59ERF family protein